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added some argument files

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caes 2017-01-11 01:45:37 -05:00
parent 6e9b08523b
commit f4475ee01e
2 changed files with 11 additions and 5 deletions
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err_type Normal file
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run_analysis.sh
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# the analyses. Parameters that this script should control: Δt, σ type, input # the analyses. Parameters that this script should control: Δt, σ type, input
# dataset(lightcurve directory), more? # dataset(lightcurve directory), more?
ref_band= ref_band=$(cat ref_band)
ref_curve="/lightcurves/${ref_band}.lc"
err_str=$(cat err_type)
mkdir -p analyses/tables mkdir -p analyses/tables
#for analysis in analyses/* #for analysis in analyses/*
for echo_curve in $lc_dir/* for echo_curve in "lightcurves/*"
do do
# Grab and determine labels of analyses, skip if over the same band. # Grab and determine labels of analyses, skip if over the same band.
ref_band=$(basename $analysis|sed 's|\([^≺]*\)[_ ]≺[_ ][^≺_ ]*[_ ]{[^_ ]*}|\1|') echo_band=$(basename $echo_curve|sed 's|\(.*\)\.lc|\1|')
echo_band=$(basename $analysis|sed 's|[^≺]*[_ ]≺[_ ]\([^≺_ ]*\)[_ ]{[^_ ]*}|\1|')
if [[ $ref_band == $echo_band ]]; then continue; fi if [[ $ref_band == $echo_band ]]; then continue; fi
err_str=$(basename $analysis|sed 's|[^≺]*[_ ]≺[_ ][^≺_ ]*[_ ]{[^_ ]*;\(σ∊[CLM][MFC]\)}|\1|')
echo "Running analysis for $echo_band ≺ $ref_band"
python scripts/analyze_lightcurve.py "$ref_curve $echo_curve" >> "analyses/${ref_band}_≺_${echo_band}"
scripts/extract_tables.pl
echo "Tabling PSD and time lags referred to ${ref_band} for $echo_band{${err_str}}." echo "Tabling PSD and time lags referred to ${ref_band} for $echo_band{${err_str}}."