psdlag-agn/run_analysis.sh
2017-01-11 01:45:37 -05:00

40 lines
1.4 KiB
Bash
Executable File
Raw Blame History

This file contains ambiguous Unicode characters

This file contains Unicode characters that might be confused with other characters. If you think that this is intentional, you can safely ignore this warning. Use the Escape button to reveal them.

#!/usr/bin/env bash
# This script is meant to encapsulate all functions in proper order to produce
# the analyses. Parameters that this script should control: Δt, σ type, input
# dataset(lightcurve directory), more?
ref_band=$(cat ref_band)
ref_curve="/lightcurves/${ref_band}.lc"
err_str=$(cat err_type)
mkdir -p analyses/tables
#for analysis in analyses/*
for echo_curve in "lightcurves/*"
do
# Grab and determine labels of analyses, skip if over the same band.
echo_band=$(basename $echo_curve|sed 's|\(.*\)\.lc|\1|')
if [[ $ref_band == $echo_band ]]; then continue; fi
echo "Running analysis for $echo_band$ref_band"
python scripts/analyze_lightcurve.py "$ref_curve $echo_curve" >> "analyses/${ref_band}_≺_${echo_band}"
scripts/extract_tables.pl
echo "Tabling PSD and time lags referred to ${ref_band} for $echo_band{${err_str}}."
# Propagate tables into analyses/tables
echoPSD_tabfile=analyses/tables/PSD_${echo_band}_\{${err_str}\}.tab
refPSD_tabfile=analyses/tables/PSD_${ref_band}_\{${err_str}\}.tab
timelag_tabfile=analyses/tables/timelag_${ref_band}_≺_${echo_band}_\{${err_str}\}.tab
# Output curves to temporary files using perl script, move tables to
# permanent location. This just assumes there are no conflicts.
scripts/extract_tables.pl $analysis > /dev/null
mv tmp.echoPSD $echoPSD_tabfile
mv tmp.refPSD $refPSD_tabfile
mv tmp.timelag $timelag_tabfile
done
rm tmp.*