industry-website/htdocs/examples/package_tables.sh

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2022-07-11 04:07:03 +00:00
#!/usr/bin/env bash
# This still isn't really generalized. Need to go to a
# specific directory of runs to run this. Feed it a list
# of column densities.
script_dir=$(
cd $(dirname $0) ;
pwd -P |sed 's@^\(.*\)/scripts.*@\1/scripts@'
)
base_dir=`pwd`
bin_dir="$script_dir/../bin"
griddir=$1
grid_id=$(echo ${griddir}|sed 's@^\.\/\(.*\)@\1@'|sed 's@.grids@@'|sed 's@\/@.@g')
if [[ -e "fortfiles_${grid_id}.tar.gz" ]]; then
echo "Package fortfiles_${grid_id}.tar.gz exists."
exit 5
else
echo "Setting up to compile fortfiles_${grid_id}.tar.gz."
fi
cd $griddir
if [[ -e "mpi_grid.out" ]]; then
echo -n ""
else
echo "mpi_grid.out doesn't exist"
cd $base_dir
exit 6
fi
mkdir -p fortfiles
cd fortfiles
# pwd
cp ../mpi_grid.in .
cp ../*.tab .
echo "Directory ready. Calling fort file creation."
$bin_dir/create_fort_files ../mpi_grid.out $script_dir/../reference/linelist.c17
echo "Applying interpolative smoothing."
$script_dir/operations/bulk_interpolation_fix.sh fort.* > interpolation_report
grid_id=$(echo ${griddir}|sed 's@^\.\/\(.*\)@\1@'|sed 's@.grids@@'|sed 's@\/@.@g')
echo "Saving $grid_id grid"
tar cf fortfiles_${grid_id}.tar *
gzip fortfiles_${grid_id}.tar
mv fortfiles_${grid_id}.tar.gz $base_dir
cd $base_dir