From c2718f5f0a1899a5607caf16bf7dce4caf829f36 Mon Sep 17 00:00:00 2001
From: caes <xaw5719@wmich.edu>
Date: Thu, 4 Aug 2016 17:14:24 -0400
Subject: [PATCH] updating initial params

---
 scripts/analyze_lightcurves.sh       | 5 +++--
 scripts/templates/thor_submit.pbs    | 2 +-
 scripts/templates/timelag_compare.gp | 2 +-
 3 files changed, 5 insertions(+), 4 deletions(-)

diff --git a/scripts/analyze_lightcurves.sh b/scripts/analyze_lightcurves.sh
index 8928cbb..023ada4 100755
--- a/scripts/analyze_lightcurves.sh
+++ b/scripts/analyze_lightcurves.sh
@@ -8,7 +8,7 @@ refpsd_params="6.533e-02 -9.694e-02 -1.175e+00 -1.525e+00 -2.166e+00 -2.492e+00
 #refpsd_params="7.376e-02 -1.976e-01 -1.182e+00 -1.521e+00 -2.144e+00 -2.503e+00 -3.580e+00 -1.233e+01"
 
 
-error_type="2"
+error_type="1"
 # error types:
 #   0 for covariance matrix, 1 for likelihood function, 2 for monte carlo
 case $error_type in
@@ -75,7 +75,8 @@ do
             initial_params="$refpsd_params -1.287e+00 -1.580e+00 -2.879e+00 -3.569e+00 -3.661e+00 -4.471e+00 -3.998e+00 -5.001e+00 -6.583e-01 -6.900e+00 -2.060e+00 -2.727e+00 -2.954e+00 -3.654e+00 -4.406e+00 -5.203e+00 1.448e-01 -1.004e-01 9.754e-01 1.140e+00 9.284e-01 1.116e+00 2.092e+00 8.634e-01"
         ;;
         "4392Å")
-            initial_params="$refpsd_params -5.521e-01 -1.135e+00 -2.691e+00 -3.626e+00 -4.510e+00 -1.036e+01 -1.076e+01 -1.213e+01 -2.515e-01 -6.156e-01 -1.924e+00 -2.417e+00 -3.053e+00 -6.570e+00 -3.450e+00 -6.333e+00 7.408e-02 3.089e-01 5.057e-01 4.831e-01 5.779e-01 6.277e-01 4.823e-01 6.110e-01"
+            initial_params="$refpsd_params -5.0e-01 -1.0e+00 -2.7e+00 -3.7e+00 -4.5e+00 -5.5e+00 -6.5e+00 -7.5e+00 -2.515e-01 -6.156e-01 -1.924e+00 -2.417e+00 -3.053e+00 -6.570e+00 -3.450e+00 -6.333e+00 0.027 0.187189 0.39349 0.479216 0.405156 0.313996 0.486696 0.502917"
+            # old params initial_params="$refpsd_params -5.0e-01 -1.0e+00 -2.7e+00 -3.7e+00 -4.5e+00 -5.5e+00 -6.5e+00 -7.5e+00 -2.515e-01 -6.156e-01 -1.924e+00 -2.417e+00 -3.053e+00 -6.570e+00 -3.450e+00 -6.333e+00 7.408e-02 3.089e-01 5.057e-01 4.831e-01 5.779e-01 6.277e-01 4.823e-01 6.110e-01"
         ;;
         "3465Å")
             initial_params="$refpsd_params -3.178e-01 -7.537e-01 -2.402e+00 -2.624e+00 -3.413e+00 -3.834e+00 -1.236e+01 -1.071e+01 -1.376e-01 -4.256e-01 -1.794e+00 -2.123e+00 -2.817e+00 -3.029e+00 -4.139e+00 -7.000e+00 7.840e-02 3.388e-01 6.616e-01 1.349e-01 9.909e-01 8.538e-01 1.397e+00 6.412e-01"
diff --git a/scripts/templates/thor_submit.pbs b/scripts/templates/thor_submit.pbs
index 84f770e..1878de9 100644
--- a/scripts/templates/thor_submit.pbs
+++ b/scripts/templates/thor_submit.pbs
@@ -1,7 +1,7 @@
 #!/bin/sh -login
 #PBS -l mem=64GB
 #PBS -l nodes=1:ppn=1:research
-#PBS -l walltime=24:00:00
+#PBS -l walltime=48:00:00
 #PBS -N "%NAME%"
 #PBS -j oe
 
diff --git a/scripts/templates/timelag_compare.gp b/scripts/templates/timelag_compare.gp
index 53027cb..7934b0d 100644
--- a/scripts/templates/timelag_compare.gp
+++ b/scripts/templates/timelag_compare.gp
@@ -11,7 +11,7 @@ set logscale x
 
 set ylabel "Lag [days]"
 #set yrange [%YMIN:%YMAX]
-
+set yrange [-5:7]
 set key outside
 set key center bottom