converting report to basic letter and working with tophat program to find -1 problem

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caes 2016-08-14 04:06:57 -04:00
parent ce5c17e6da
commit 6aaec3e453
6 changed files with 235 additions and 1093 deletions

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@ -1,9 +0,0 @@
\BOOKMARK [1][-]{section.1}{Introduction}{}% 1
\BOOKMARK [2][-]{subsection.1.1}{Reverberation Mapping}{section.1}% 2
\BOOKMARK [2][-]{subsection.1.2}{Unevenly-Spaced Data}{section.1}% 3
\BOOKMARK [1][-]{section.2}{Analysis}{}% 4
\BOOKMARK [2][-]{subsection.2.1}{Dataset}{section.2}% 5
\BOOKMARK [2][-]{subsection.2.2}{Error Analysis}{section.2}% 6
\BOOKMARK [1][-]{section.3}{Results}{}% 7
\BOOKMARK [2][-]{subsection.3.1}{Dubious Error Computations}{section.3}% 8
\BOOKMARK [1][-]{section.4}{Discussion}{}% 9

View File

@ -1,94 +1,14 @@
% mnras_template.tex \documentclass[11pt,letterpaper]{article}
%
% LaTeX template for creating an MNRAS paper
%
% v3.0 released 14 May 2015
% (version numbers match those of mnras.cls)
%
% Copyright (C) Royal Astronomical Society 2015
% Authors:
% Keith T. Smith (Royal Astronomical Society)
% Change log \usepackage{natbib}
% \usepackage{graphicx}
% v3.0 May 2015 \usepackage[margin=1.in,centering]{geometry}
% Renamed to match the new package name
% Version number matches mnras.cls
% A few minor tweaks to wording
% v1.0 September 2013
% Beta testing only - never publicly released
% First version: a simple (ish) template for creating an MNRAS paper
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% Basic setup. Most papers should leave these options alone.
\documentclass[a4paper,fleqn,usenatbib]{article}
% MNRAS is set in Times font. If you don't have this installed (most LaTeX
% installations will be fine) or prefer the old Computer Modern fonts, comment
% out the following line
\usepackage{newtxtext,newtxmath}
% Depending on your LaTeX fonts installation, you might get better results
% with one of these:
%\usepackage{mathptmx}
%\usepackage{txfonts}
% Use vector fonts, so it zooms properly in on-screen viewing software
% Don't change these lines unless you know what you are doing
\usepackage[T1]{fontenc}
\usepackage{ae,aecompl}
%%%%% AUTHORS - PLACE YOUR OWN PACKAGES HERE %%%%%
% Only include extra packages if you really need them. Common packages are:
\usepackage{graphicx} % Including figure files
\usepackage{amsmath} % Advanced maths commands
\usepackage{amssymb} % Extra maths symbols
\begin{document} \begin{document}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%%%% AUTHORS - PLACE YOUR OWN COMMANDS HERE %%%%% Consider two lightcurves $x(t)$ and $y(t)$, where $x(t)$ is the driving lightcurve and $y(t)$ is the reprocessed lightcurve. If they are related by a linear impulse response, $g(\tau)$, then:
% Please keep new commands to a minimum, and use \newcommand not \def to avoid
% overwriting existing commands. Example:
%\newcommand{\pcm}{\,cm$^{-2}$} % per cm-squared
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%%%%%%%%%%%%%%%%%% TITLE PAGE %%%%%%%%%%%%%%%%%%%
% Title of the paper, and the short title which is used in the headers.
% Keep the title short and informative.
\title[Optical Reverberation with Max Likelihood; NGC 5548]{Optical
Reverberation Mapping of NGC 5548 with Maximum Likelihood}
% The list of authors, and the short list which is used in the headers.
% If you need two or more lines of authors, add an extra line using \newauthor
\author[Ulrich et al.]{
Otho A. Ulrich,$^{2}$\thanks{E-mail: otho.a.ulrich@wmich.edu}
Edward M. Cackett,$^{1}$
\\
% List of institutions
$^{1}$Department of Physics and Astronomy, Wayne State University, 666 W.
Hancock St., Detroit, MI 48201, USA\\
$^{2}$Department of Physics, Western Michigan University, Kalamazoo, MI
49008-5252, USA\\
}
% These dates will be filled out by the publisher
%\date{Accepted XXX. Received YYY; in original form ZZZ}
\date{August 8, 2016}
% Enter the current year, for the copyright statements etc.
% \pubyear{2016}
% Don't change these lines
\label{firstpage}
%\pagerange{\pageref{firstpage}--\pageref{lastpage}}
\maketitle
% Abstract of the paper
\begin{abstract} \begin{abstract}
Power spectral densities and time delays of 19 wavelength bands are recovered Power spectral densities and time delays of 19 wavelength bands are recovered
as part of a reverberation mapping of NGC 5548. The latest time-variable light as part of a reverberation mapping of NGC 5548. The latest time-variable light
@ -104,15 +24,8 @@ be recoverable once those and any additional computational issues are
resolved. resolved.
\end{abstract} \end{abstract}
% Select between one and six entries from the list of approved keywords.
% Don't make up new ones.
\begin{keywords}
keyword1 -- keyword2 -- keyword3
\end{keywords}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%%%%%%%%%%%%%%%% BODY OF PAPER %%%%%%%%%%%%%%%%%%
\section{Introduction} \section{Introduction}
The local Type-I Seyfert galaxy NGC 5548, while perhaps the best-studied The local Type-I Seyfert galaxy NGC 5548, while perhaps the best-studied
@ -278,43 +191,42 @@ is a significant step toward that goal.
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%%%%%%%%%%%%%%%%%%% REFERENCES %%%%%%%%%%%%%%%%%%
% The best way to enter references is to use BibTeX:
\bibliographystyle{mnras}
\bibliography{wsu_reu} % if your bibtex file is called example.bib
% Alternatively you could enter them by hand, like this:
% This method is tedious and prone to error if you have lots of references
% \begin{thebibliography}{99}
% \bibitem[\protect\citeauthoryear{Author}{2012}]{Author2012}
% Author A.~N., 2013, Journal of Improbable Astronomy, 1, 1
% \bibitem[\protect\citeauthoryear{Others}{2013}]{Others2013}
% Others S., 2012, Journal of Interesting Stuff, 17, 198
% \end{thebibliography}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%%%%%%%%%%%%%%%% APPENDICES %%%%%%%%%%%%%%%%%%%%%
% \appendix
%
% \section{Some extra material}
%
% If you want to present additional material which would interrupt the flow of
% the main paper, it can be placed in an Appendix which appears after the list
% of references.
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% Don't change these lines
\bsp % typesetting comment
\label{lastpage} \begin{equation}
y(t) = \int_{-\infty}^{\infty} g(\tau) x(t-\tau) {\rm d}\tau
\end{equation}
So, $y(t)$ is a delayed and blurred version of $x(t)$, with the amount of delay and blurring encoded in $g(\tau)$.
The power spectral density (PSD) of $x(t)$ is calculated from the Fourier transform of $x(t)$, which we denote $X(\nu)$. The PSD is $|X(\nu)|^2 = X^*(\nu)X(\nu)$, where the $^*$ denotes the complex conjugate. From the convolution theorem of Fourier transforms we can write:
\begin{equation}
Y(\nu) = G(\nu) X(\nu)
\end{equation}
This means it is easy to relate the PSD of the reprocessed lightcurve to the PSD of the driving lightcurve and the impulse response function:
\begin{equation}
|Y(\nu)|^2 = |G(\nu)|^2 |X(\nu)|^2
\end{equation}
The cross spectrum is defined as
\begin{equation}
C(\nu) = X^*(\nu) Y(\nu)
\end{equation}
the phase, $\phi$, of which gives the phase lag between X and Y at each Fourier frequency, $\nu$. This can be converted to a time lag through:
\begin{equation}
\tau(\nu) = \frac{\phi(\nu)}{2\pi\nu}
\end{equation}
Since $Y(\nu) = G(\nu) X(\nu)$, the cross spectrum can be written as:
\begin{equation}
C(\nu) = X^*(\nu) G(\nu) X(\nu) = G(\nu) |X(\nu)|^2
\end{equation}
thus, for a given impulse response function, one can trivially predict the time lags as a function of frequency, $\tau(\nu)$, by calculating the phase of $G(\nu)$, and the frequency dependence of the lags directly relates to the shape of the response function.
\end{document} \end{document}
% End of mnras_template.tex

View File

@ -63,7 +63,9 @@ foreach (@tophat_list) {
# This currently multiplies the imaginary component by -1, # This currently multiplies the imaginary component by -1,
# and I really need to figure out why this is necessary for # and I really need to figure out why this is necessary for
# proper output. # proper output.
my $φdiff = atan2(-$V,$U); my $φdiff = atan2($V,$U);
wcols $f,$φdiff,"analyses/tables/tophat_φdiff"
my $offset = $φdiff/($_2π*$f); my $offset = $φdiff/($_2π*$f);
# Output frequency-domain time delay for given tophat # Output frequency-domain time delay for given tophat