lammps-graphene/scripts/lammps/strain.lmp

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2020-12-23 22:12:07 +00:00
# Relax atoms and box
units metal
atom_style atomic
dimension 3
boundary p p m
read_data _DATA_FILE
pair_style sedrebo 0.0 0 0
pair_coeff * * _POTENTIAL_FILE C
velocity all create 0. 493838
compute bond_length all pair/local dist
compute atomic_energy all pe/atom
compute atomic_stress all stress/atom
variable atomic_pressure atom (c_atomic_stress[1]+c_atomic_stress[2])/2
timestep 0.0002
thermo 1
thermo_style custom step etotal press lx ly lz pxx pyy pzz pxy pxz pyz
thermo_modify format float %.10f
dump RDUMP all custom 1 _OUTPUT_DIR/*.dump id x y z c_atomic_energy v_atomic_pressure c_atomic_stress[1] c_atomic_stress[2] c_atomic_stress[3] c_atomic_stress[4] c_atomic_stress[5] c_atomic_stress[6]
dump coord_dump all custom 20000 _OUTPUT_DIR/*.coorddump id type xs ys zs
minimize 1.0e-12 1.0e-6 10000 600000
min_style cg