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https://asciireactor.com/otho/cloudy-agn.git
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56 lines
1.6 KiB
Bash
Executable File
56 lines
1.6 KiB
Bash
Executable File
#!/usr/local/bin/bash
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# This still isn't really generalized. Need to go to a
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# specific directory of runs to run this. Feed it a list
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# of column densities.
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script_dir=$(
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cd $(dirname $0) ;
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pwd -P |sed 's@^\(.*\)/scripts.*@\1/scripts@'
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)
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base_dir=`pwd`
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bin_dir="$script_dir/../bin"
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cldndir=$1
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cd $cldndir
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mkdir -p fortfiles
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cd fortfiles
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# pwd
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echo "Directory ready. Calling fort file creation."
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# $bin_dir/create_fort_files ../mpi_grid.out $script_dir/../reference/linelist
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allfortnums=$(echo fort.*|sed 's@fort\.\([0-9]\+\)@\1@g')
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inwTfortnums=$(grep 'InwT' fort.*|sed 's@^fort\.\([0-9]\+\):InwT.*@\1@')
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echo "Generating inward diffuse tables for $(echo "$inwTfortnums"|wc -l) coordinates."
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for inwTnum in $inwTfortnums
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do
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inwCnum=$(($inwTnum + 1))
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inwDnum=$(($inwCnum + 1))
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fortnumstoproc=""
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for fortnum in $allfortnums
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do
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if [[ $fortnum > $inwCnum ]]
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then
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fortnumstoproc="$fortnum $fortnumstoproc"
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fi
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done
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echo "Shifting $( echo "$fortnumstoproc"|wc -w ) files."
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for fortnum in $fortnumstoproc
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do
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newnum=$(( $fortnum + 1 ))
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mv fort.$fortnum fort.$newnum
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done
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echo "Writing inwD table to fort.$inwDnum"
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$bin_dir/subtract_fortfiles fort.$inwTnum fort.$inwCnum > fort.$inwDnum
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done
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echo "Applying interpolative smoothing."
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$script_dir/operations/bulk_interpolation_fix.sh fort.* > interpolation_report
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tar cf ngc5548_mehdipour_4thdexgrid_${cldndir}.tar *
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gzip ngc5548_mehdipour_4thdexgrid_${cldndir}.tar
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mv ngc5548_mehdipour_4thdexgrid_${cldndir}.tar.gz $base_dir/..
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