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updated thor run script

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othocaeS 2016-05-12 19:44:45 -04:00
parent dc838116a4
commit 407c2c5775
2 changed files with 2 additions and 20 deletions
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4
scripts/thor/cloudy_grid.pbs
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@ -1,8 +1,8 @@
#!/bin/sh -login
#PBS -l mem=128GB
#PBS -l nodes=4:ppn=16:research
#PBS -l walltime=150:00:00
#PBS -N cldy_4_181515_23
#PBS -l walltime=169:00:00
#PBS -N ngc5548_cldn23
#PBS -j oe

18
scripts/thor/mpi_grid_template.pbs
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@ -1,18 +0,0 @@
#!/bin/sh -login
#PBS -l mem=128GB
#PBS -l nodes=4:ppn=16:research
#PBS -l walltime=150:00:00
#PBS -N .25_181515_cldn23
#PBS -j oe
RUN_FILE="mpi_grid"
RUN_DIR="cloudy/runs/4thdex_181515models_23cldn"
num_proc=$(cat ${PBS_NODEFILE} | wc -l)
module load openmpi/gnu/1.7.3
# replace ~/cloudy/cloudy_mpi with path to cloudy MPI executable file
cd ~/${RUN_DIR}
time mpirun -machinefile ${PBS_NODEFILE} -np ${num_proc} ~/cloudy/cloudy_mpi -r ${RUN_FILE}