diff --git a/src/sed/magdziarz/components.csv b/sed/magdziarz1997/components.csv similarity index 100% rename from src/sed/magdziarz/components.csv rename to sed/magdziarz1997/components.csv diff --git a/reference/magdziarz1997.tab b/sed/magdziarz1997/magdziarz1997.tab similarity index 100% rename from reference/magdziarz1997.tab rename to sed/magdziarz1997/magdziarz1997.tab diff --git a/src/sed/magdziarz/.RData b/src/sed/magdziarz/.RData deleted file mode 100644 index 9ff2437..0000000 Binary files a/src/sed/magdziarz/.RData and /dev/null differ diff --git a/src/sed/magdziarz/.Rhistory b/src/sed/magdziarz/.Rhistory deleted file mode 100644 index cd1272f..0000000 --- a/src/sed/magdziarz/.Rhistory +++ /dev/null @@ -1,146 +0,0 @@ -data=read.csv("components.csv",header=T) -plot(data,log="xy",ylim=c(.0003,.1),xlim=c(.001,1000)) -plot(data,log="xy",ylim=c(.0003,.2),xlim=c(.001,1000)) -data$test_sum = data$blackbody_sum_1 + data$comptonization + data$excess -plot(data,log="xy",ylim=c(.0003,.2),xlim=c(.001,1000)) -data$test_error = data$total - data$test_sum -plot(data,log="xy",ylim=c(.0003,.2),xlim=c(.001,1000)) -warnings() -plot(data,log="xy",ylim=c(.0003,.2),xlim=c(.001,1000)) -head(data) -mean(data$total - data$test_error) -mean((data$total - data$test_error)^2) -mean(sqrt((data$total - data$test_error)^2)) -data$test_sum = data$blackbody_sum_2 + data$comptonization + data$excess -mean(sqrt((data$total - data$test_error)^2)) -mean(sqrt((data$total - data$test_sum)^2)) -data$test_sum = data$blackbody_sum_1 + data$comptonization + data$excess -mean(sqrt((data$total - data$test_sum)^2)) -plot(data,log="xy",ylim=c(.0003,.2),xlim=c(.001,1000)) -data$test_error = data$total - data$test_sum -plot(data,log="xy",ylim=c(.0003,.2),xlim=c(.001,1000)) -data$test_sum = data$blackbody_sum_2 + data$comptonization + data$excess -plot(data,log="xy",ylim=c(.0003,.2),xlim=c(.001,1000)) -data$test_error = data$total - data$test_sum -mean(sqrt((data$total - data$test_sum)^2)) -rms -?rms -library(rms) -data$test_error = data$total - data$test_sum -plot(data,log="xy",ylim=c(.0003,.2),xlim=c(.001,1000)) -data$test_error_sq = (data$total - data$test_sum)^2 -plot(data,log="xy",ylim=c(.0003,.2),xlim=c(.001,1000)) -data = read.csv("components.csv",header=t) -data = read.csv("components.csv",header=T) -plot(data,log="xy",ylim=c(.0003,.2),xlim=c(.001,1000)) -data$test_sum_1 = data$blackbody_sum_1 + data$comptonization + data$excess -data$err_1_sq = (data$total - data$test_sum)^2 -data$test_sum_2 = data$blackbody_sum_2 + data$comptonization + data$excess -data$err_2_sq = (data$total - data$test_sum_2)^2 -data$err_1_sq = (data$total - data$test_sum_1)^2 -plot(data,log="xy",ylim=c(.0003,.2),xlim=c(.001,1000)) -warnings() -data$err_1_sq = (data$total - data$test_sum)^2 -data$err_1_sq = (data$total - data$test_sum_1)^2 -plot(data,log="xy",ylim=c(.0003,.2),xlim=c(.001,1000)) -attach(data) -plot(err_1_sq ~ energy..keV.) -plot(err_2_sq ~ energy..keV.) -head(err_1_sq) -head(err_2_sq) -plot(err_2_sq ~ energy..keV.,log="x") -plot(err_1_sq ~ energy..keV.,log="x") -plot(total ~ energy..keV.,log="x") -contour() -?read.table -TOTL1216 = read.table("../../../TOTL1216.tab",header=T) -head(TOTL1216) -contour(TOTL1216) -man contour() -?contour -contour(TOTL1216$Hden,TOTL1216$Phi.H.,TOTL1216$Eq_Width.A.) -?contour -contour(TOTL1216$Phi.H.,TOTL1216$Hden,TOTL1216$Eq_Width.A.) -TOTL1216 -contour(TOTL1216$Phi.H.,TOTL1216$Hden,TOTL1216$Eq_Width.A.) -contour(y = TOTL1216$Phi.H.,x = TOTL1216$Hden,z = TOTL1216$Eq_Width.A.) -?contour -?contour -contour(seq(1:4),seq(5:8),seq(3:6)) -?contour -?op -?op -?opar -?contour -filled.contour -?filled.contour -filled.contour(seq(1:4),seq(5:8),seq(3:6)) -contour(y = TOTL1216$Phi.H.,x = TOTL1216$Hden,z = TOTL1216$Eq_Width.A.) -TOTL1216$Hden -TOTL1216$Phi.H. -?sort -TOTL1216[order(TOTL1216$Phi.H.,TOTL1216$Hden)] -TOTL1216[order(Phi.H.,Hden)] -TOTL1216[order(TOTL1216$Phi.H.,Hden)] -TOTL1216[order(TOTL1216$Phi.H.,Hden),] -TOTL1216[order(TOTL1216$Phi.H.,TOTL1216$Hden),] -TOTL1216[order(TOTL1216$Hden,TOTL1216$Phi.H.),] -library(ggplot) -library(ggplot2) -library(ggplot2) -ggplot(Statsrep, aes(x=X, y=Y, z=Zn)) + - geom_density2d() -ggplot(Statsrep, aes(x=TOTL1216$Hden, y=TOTL1216$Phi.H., z=TOTL1216$Eq_Width.A.)) + -ggplot(Statsrep, aes(x=TOTL1216$Hden, y=TOTL1216$Phi.H., z=TOTL1216$Eq_Width.A.)) + geom_density2d() -library(stats) -ggplot(Statsrep, aes(x=TOTL1216$Hden, y=TOTL1216$Phi.H., z=TOTL1216$Eq_Width.A.)) + geom_density2d() -?ggplot -ggplot(TOTL1216, aes(x=Hden, y=Phi.H., z=Eq_Width.A.)) + geom_density2d() -TOTL1216$Eq_Width.A. -ggplot(TOTL1216, aes(x=Hden, y=Phi.H., z=Eq_Width.A.)) + geom_density2d() -ggplot(TOTL1216, aes(x=Hden, y=Phi.H., z=Eq_Width.A.)) + geom_density2d() -ggplot(TOTL1216, aes(x=Hden, y=Phi.H., z=Eq_Width.A.)) -?ggplot -?interp -ggplot(TOTL1216, aes(x=Hden, y=Phi.H., z=Eq_Width.A.)) + geom_contour() -ggplot(TOTL1216, aes(x=Hden, y=Phi.H., z=Eq_Width.A.)) + geom_contour(alpha=0.5) -ggplot(TOTL1216, aes(x=Hden, y=Phi.H., z=Eq_Width.A.)) + geom_contour(alpha=1) -ggplot(TOTL1216, aes(x=Hden, y=Phi.H., z=Eq_Width.A.)) + - geom_tile() + - coord_equal() + - geom_contour(color = "white", alpha = 0.5) + - s - theme_bw() -ggplot(TOTL1216, aes(x=Hden, y=Phi.H., z=Eq_Width.A.)) + - geom_tile() + - coord_equal() + - geom_contour(color = "white", alpha = 0.5) + - theme_bw() -ggplot(TOTL1216, aes(x=Hden, y=Phi.H., z=Eq_Width.A.)) + - geom_tile("TOTL 1216") + - coord_equal() + - geom_contour(color = "white", alpha = 0.5) + - theme_bw() -ggplot(TOTL1216, aes(x=Hden, y=Phi.H., z=Eq_Width.A.)) + - geom_tile() + - coord_equal() + - geom_contour(color = "white", alpha = 0.5) + - theme_bw() -?ggplot -plot(data,log="xy",ylim=c(.0003,.2),xlim=c(.001,1000)) -plot(err_1_sq ~ energy..keV.) -plot(err_1_sq ~ energy..keV.,log="x") -plot(data,log="xy",ylim=c(.0003,.2),xlim=c(.001,1000)) -plot(err_2_sq ~ energy..keV.,log="x") -plot(total ~ energy..keV.,log="x") -mean(sqrt((data$total - data$test_sum)^2)) -mean(sqrt((data$total - data$test_sum_1)/data$total)) -mean((data$total - data$test_sum_1)/data$total) -mean((data$total - data$test_sum_2)/data$total) -plot(data,log="xy",ylim=c(.0003,.2),xlim=c(.001,1000)) -ggplot(TOTL1216, aes(x=Hden, y=Phi.H., z=Eq_Width.A.)) + - geom_tile() + - coord_equal() + - geom_contour(color = "white", alpha = 0.5) + - theme_bw() -q()