Science/cloudy-agn
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updated readme

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README
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Quick Reference:
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Quick Reference
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Basic work-flow to create a thor run and generate flux tables
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This is covered in detail in "cloudy-agn/notes/thor_guide"
"ssh -X kkorista@thor.cs.wmich.edu" to connect
"qnodes | grep -B2 researcj|less" to get a list of available nodes
@ -41,6 +45,10 @@ Compiling cloudy on Thor
Load one of the openmpi modules before compiling the mpi version of cloudy
move to the relevant source directory, e.g., "c17.00/source/sys_mpi_gcc"
"make" to build the program, which compiles to cloudy.exe
Getting the latest version of my software
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@ -50,7 +58,7 @@ rsync -aac kkorista@159.203.46.10:~/cloudy.agn <local dir>
<local dir> command line argument here is where you want to save the project on your local machine, use "." for current directory
use SSH keys
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This creates a public key and a private key and sends the public key to the remote server, which is sufficient for secure authentication.
"ssh-keygen" to create and save a key