Science/clag-agn
1
0
Fork 0
mirror of https://asciireactor.com/otho/clag-agn.git synced 2024-11-24 06:35:07 +00:00
Code Issues Packages Projects Releases Wiki Activity

more changes

Browse Source
This commit is contained in:
caes 2017-06-22 06:36:22 -04:00
parent 17eee222af
commit 56e53ed95b
3 changed files with 17 additions and 17 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

20
scripts/compute_psdlags.sh
View File

@ -3,6 +3,7 @@
mkdir -p data mkdir -p data
ref_band="1367A" ref_band="1367A"
refpsd_tabfile=data/tables/psd_${ref_band}.tab
for lightcurve in data/lc/*.lc for lightcurve in data/lc/*.lc
do do
@ -11,20 +12,21 @@ do
if [[ $ref_band == $echo_band ]]; then continue; fi if [[ $ref_band == $echo_band ]]; then continue; fi
err_str="LF" err_str="LF"
# Save tables with these filenames
echopsd_tabfile=data/tables/psd_${echo_band}.tab
timelag_tabfile=data/tables/lag_${ref_band}_${echo_band}.tab
echo -n "Running psdlag using ref band ${ref_band}" echo -n "Running psdlag using ref band ${ref_band}"
echo " and echo band $echo_band{${err_str}}." echo " and echo band $echo_band{${err_str}}."
scripts/psdlag_4bin.py # psdlag python script will call clag and print tables
# tmp.* files.
echo scripts/psdlag_4bin.py ${ref_band}.lc $lightcurve
# Propagate tables into analyses/tables # process_tables perl script reads tmp.* files and creates some
echoPSD_tabfile=analyses/tables/PSD_${echo_band}_\{${err_str}\}.tab # other useful tables
refPSD_tabfile=analyses/tables/PSD_${ref_band}_\{${err_str}\}.tab scripts/process_tables.pl $lightcurve > /dev/null
timelag_tabfile=analyses/tables/timelag_${ref_band}_≺_${echo_band}_\{${err_str}\}.tab
# Output curves to temporary files using perl script, move tables to
# permanent location. This just assumes there are no conflicts.
scripts/extract_tables.pl $lightcurve > /dev/null
mv tmp.echoPSD $echoPSD_tabfile mv tmp.echoPSD $echoPSD_tabfile
mv tmp.refPSD $refPSD_tabfile mv tmp.refPSD $refPSD_tabfile
mv tmp.timelag $timelag_tabfile mv tmp.timelag $timelag_tabfile

10
scripts/plot.sh
View File

@ -3,16 +3,14 @@
# This metascript uses the available plotting scripts to produce a list of # This metascript uses the available plotting scripts to produce a list of
# document-rady plots. # document-rady plots.
# Only analyses with this error type will be represented in the atlas ref_band="1367A"
errtype=$(cat err_type)
ref_band="1367Å"
case $1 in case $1 in
"PSD"|"psd"|"PSDs"|"PSDS"|"psds") "PSD"|"psd"|"PSDs"|"PSDS"|"psds")
gnuplot_file=psd_atlas.gp gnuplot_file=psd_atlas.gp
scripts/propagate_tables.sh scripts/propagate_tables.sh
gnuplot_input=$(cat scripts/templates/${gnuplot_file}|perl -pe 's|\n|␤|g') gnuplot_input=$(cat scripts/templates/${gnuplot_file}|perl -pe 's|\n|␤|g')
for tabfile in analyses/tables/PSD_*${errtype}*.tab; for tabfile in data/tables/PSD_*${errtype}*.tab;
do do
echo_band=$(basename $tabfile| echo_band=$(basename $tabfile|
sed 's|PSD[_ ]\(.\{5\}\)[_ ]{[^_ ]*}.tab|\1|') sed 's|PSD[_ ]\(.\{5\}\)[_ ]{[^_ ]*}.tab|\1|')
@ -30,7 +28,7 @@ case $1 in
gnuplot_file=timelag_atlas.gp gnuplot_file=timelag_atlas.gp
gnuplot_input=$(cat scripts/templates/${gnuplot_file}|perl -pe 's|\n|␤|g') gnuplot_input=$(cat scripts/templates/${gnuplot_file}|perl -pe 's|\n|␤|g')
scripts/propagate_tables.sh scripts/propagate_tables.sh
for tabfile in analyses/tables/timelag_*${errtype}*.tab; for tabfile in data/tables/timelag_*${errtype}*.tab;
do do
ref_band_extracted=$(basename $tabfile|sed 's|timelag_\([^≺]*\)[_ ]≺[_ ][^≺_ ]*[_ ]{[^_ ]*}.tab|\1|') ref_band_extracted=$(basename $tabfile|sed 's|timelag_\([^≺]*\)[_ ]≺[_ ][^≺_ ]*[_ ]{[^_ ]*}.tab|\1|')
echo_band=$(basename $tabfile|sed 's|timelag_[^≺]*[_ ]≺[_ ]\([^≺_ ]*\)[_ ]{[^_ ]*}.tab|\1|') echo_band=$(basename $tabfile|sed 's|timelag_[^≺]*[_ ]≺[_ ]\([^≺_ ]*\)[_ ]{[^_ ]*}.tab|\1|')
@ -45,7 +43,7 @@ case $1 in
;; ;;
"tophat"|"th") "tophat"|"th")
mkdir -p analyses/tables/ mkdir -p data/tables/
scripts/tophat_fft.pl scripts/tophat_fft.pl
gnuplot scripts/templates/tophat_freqdomain.gp gnuplot scripts/templates/tophat_freqdomain.gp
gnuplot scripts/templates/tophat_timedomain.gp gnuplot scripts/templates/tophat_timedomain.gp

0
scripts/extract_tables.pl → scripts/process_tables.pl
View File